Title | Tools for building de novo transcriptome assembly |
Publication Type | Journal Article |
Year of Publication | 2017 |
Authors | Geniza, M, Jaiswal, P |
Journal | Current Plant Biology |
Volume | 11-12 |
Pagination | 41 - 45 |
ISSN | 2214-6628 |
Keywords | BinPacker, CD-HIT-ES, De novo assembly, de novo transcriptome assembly, Differential gene expression, Gene Expression, Gene Ontology, Genetic marker identification, Genome annotation, Plant gene expression, Plant Ontology, Plant Reactome, RNA QUAST, RNA-Seq, SPAdes, Transcriptiome, TransRate, Trinity, Velvet Oases |
Abstract |
The availability of RNA-Seq method allows researchers to capture the spatial or temporal profile of transcriptomes from various types of biological samples. |
URL | http://www.sciencedirect.com/science/article/pii/S2214662817301032 |
DOI | 10.1016/j.cpb.2017.12.004 |