College of Agricultural Sciences

S. Naithani and Jaiswal, P., “Pathway Analysis and Omics Data Visualization Using Pathway Genome Databases: FragariaCyc, a Case Study.”, Methods in molecular biology (Clifton, N.J.), vol. 1533, pp. 241-256, 2017.

A. Gouin, Bretaudeau, A., Nam, K., Gimenez, S., Aury, J. - M., Duvic, B., Hilliou, F., Durand, N., Montagné, N., Darboux, I., Kuwar, S., Chertemps, T., Siaussat, D., Bretschneider, A., Moné, Y., Ahn, S. - J., Hänniger, S., Grenet, A. - S. Gosselin, Neunemann, D., Maumus, F., Luyten, I., Labadie, K., Xu, W., Koutroumpa, F., Escoubas, J. - M., Llopis, A., Maïbèche-Coisne, M., Salasc, F., Tomar, A., Anderson, A. R., Khan, S. Afzal, Dumas, P., Orsucci, M., Guy, J., Belser, C., Alberti, A., Noel, B., Couloux, A., Mercier, J., Nidelet, S., Dubois, E., Liu, N. - Y., Boulogne, I., Mirabeau, O., Le Goff, G., Gordon, K., Oakeshott, J., Consoli, F. L., Volkoff, A. - N., Fescemyer, H. W., Marden, J. H., Luthe, D. S., Herrero, S., Heckel, D. G., Wincker, P., Kergoat, G. J., Amselem, J., Quesneville, H., Groot, A. T., Jacquin-Joly, E., Nègre, N., Lemaitre, C., Legeai, F., d'Alençon, E., and Fournier, P., “Two genomes of highly polyphagous lepidopteran pests (Spodoptera frugiperda, Noctuidae) with different host-plant ranges.”, Sci Rep, vol. 7, no. 1, p. 11816, 2017.

E. N. C. Renaud, van Bueren, E. T. Lammert, Myers, J. R., Paulo, M. João, van Eeuwijk, F. A., Zhu, N., and Juvik, J. A., “Variation in broccoli cultivar phytochemical content under organic and conventional management systems: implications in breeding for nutrition.”, PLoS One, vol. 9, no. 7, p. e95683, 2014.

P. D. Shirk, Shapiro, J. P., Reitz, S. R., Thomas, J. M. G., Koenig, R. L., Hay-Roe, M. M., and Buss, L. J., “Predator-prey relationships on Apiaceae at an organic farm.”, Environ Entomol, vol. 41, no. 3, pp. 487-96, 2012.

R. S. Rasmusse Hellberg and Morrissey, M. T., “Advances in DNA-based techniques for the detection of seafood species substitution on the commercial market.”, J Lab Autom, vol. 16, no. 4, pp. 308-21, 2011.

M. A. Carvallo, Pino, M. - T., Jeknić, Z., Zou, C., Doherty, C. J., Shiu, S. - H., Chen, T. H. H., and Thomashow, M. F., “A comparison of the low temperature transcriptomes and CBF regulons of three plant species that differ in freezing tolerance: Solanum commersonii, Solanum tuberosum, and Arabidopsis thaliana.”, J Exp Bot, vol. 62, no. 11, pp. 3807-19, 2011.

Y. Gao, Lei, Z., Abe, Y., and Reitz, S. R., “Species displacements are common to two invasive species of leafminer fly in China, Japan, and the United States.”, J Econ Entomol, vol. 104, no. 6, pp. 1771-3, 2011.

Y. Li, Ross-Viola, J. S., Shay, N. F., Moore, D. D., and Ricketts, M. - L., “Human CYP3A4 and murine Cyp3A11 are regulated by equol and genistein via the pregnane X receptor in a species-specific manner.”, J Nutr, vol. 139, no. 5, pp. 898-904, 2009.

D. R. Paini, Funderburk, J. E., and Reitz, S. R., “Competitive exclusion of a worldwide invasive pest by a native. Quantifying competition between two phytophagous insects on two host plant species.”, J Anim Ecol, vol. 77, no. 1, pp. 184-90, 2008.

M. - T. Pino, Skinner, J. S., Jeknić, Z., Hayes, P. M., Soeldner, A. H., Thomashow, M. F., and Chen, T. H. H., “Ectopic AtCBF1 over-expression enhances freezing tolerance and induces cold acclimation-associated physiological modifications in potato.”, Plant Cell Environ, vol. 31, no. 4, pp. 393-406, 2008.

S. M. M. Malowicki, Martin, R., and Qian, M. C., “Volatile composition in raspberry cultivars grown in the Pacific Northwest determined by stir bar sorptive extraction-gas chromatography-mass spectrometry.”, J Agric Food Chem, vol. 56, no. 11, pp. 4128-33, 2008.

H. - J. Kim, Park, S. - H., and Kim, H. - Y., “Comparison of Salmonella enterica serovar Typhimurium LT2 and non-LT2 salmonella genomic sequences, and genotyping of salmonellae by using PCR.”, Appl Environ Microbiol, vol. 72, no. 9, pp. 6142-51, 2006.

Y. - C. Su, Duan, J., and Wu, W. - H., “Selectivity and specificity of a chromogenic medium for detecting Vibrio parahaemolyticust.”, J Food Prot, vol. 68, no. 7, pp. 1454-6, 2005.

M. J. Reimers, Hahn, M. E., and Tanguay, R. L., “Two zebrafish alcohol dehydrogenases share common ancestry with mammalian class I, II, IV, and V alcohol dehydrogenase genes but have distinct functional characteristics.”, J Biol Chem, vol. 279, no. 37, pp. 38303-12, 2004.

Z. Cao, Tanguay, R. L., McKenzie, D., Peterson, R. E., and Aiken, J. M., “Identification of a putative calcium-binding protein as a dioxin-responsive gene in zebrafish and rainbow trout.”, Aquat Toxicol, vol. 63, no. 3, pp. 271-82, 2003.

P. Williams, Whitfield, M., Biggs, J., Fox, G., Nicolet, P., Shillabeer, N., Sherratt, T., Heneghan, P., Jepson, P., and Maund, S., “How realistic are outdoor microcosms? A comparison of the biota of microcosms and natural ponds.”, Environ Toxicol Chem, vol. 21, no. 1, pp. 143-50, 2002.

M. - Y. Choi, Han, K. Sik, Boo, K. Saeng, and Jurenka, R. A., “Pheromone biosynthetic pathways in the moths Helicoverpa zea and Helicoverpa assulta.”, Insect Biochem Mol Biol, vol. 32, no. 11, pp. 1353-9, 2002.

C. C. Abnet, Tanguay, R. L., Heideman, W., and Peterson, R. E., “Transactivation activity of human, zebrafish, and rainbow trout aryl hydrocarbon receptors expressed in COS-7 cells: greater insight into species differences in toxic potency of polychlorinated dibenzo-p-dioxin, dibenzofuran, and biphenyl congeners.”, Toxicol Appl Pharmacol, vol. 159, no. 1, pp. 41-51, 1999.

H. Le, Chang, S. C., Tanguay, R. L., and Gallie, D. R., “The wheat poly(A)-binding protein functionally complements pab1 in yeast.”, Eur J Biochem, vol. 243, no. 1-2, pp. 350-7, 1997.