Biblio

P. Piantoni, Bionaz, M., Graugnard, D. E., Daniels, K. M., Everts, R. E., Rodriguez-Zas, S. L., Lewin, H. A., Hurley, H. L., Akers, M., and Loor, J. J., “Functional and gene network analyses of transcriptional signatures characterizing pre-weaned bovine mammary parenchyma or fat pad uncovered novel inter-tissue signaling networks during development.”, BMC Genomics, vol. 11, p. 331, 2010.

T. Delcurto, Cooke, R. F., Boyd, C. S., and Bohnert, D. W., “Oregon Beef Council Report: 2010 Edition”. Oregon State University/ Beef Cattle Sciences/ Extension Service, 2010.

J. D. Rowe, Harbertson, J. F., Osborne, J. P., Freitag, M., Lim, J., and Bakalinsky, A. T., “Systematic identification of yeast proteins extracted into model wine during aging on the yeast lees.”, J Agric Food Chem, vol. 58, no. 4, pp. 2337-46, 2010.

D. W. Bohnert and Cooke, R. F., “Applied nutritional strategies for the Northwest”, in Applied Reproductive Strategies in Beef Cattle-Northwest, Conference Proceedings. Boise, ID, 2011.

R. F. Cooke, Bohnert, D. W., Moriel, P., Hess, B. W., and Mills, R. R., “Effects of polyunsaturated fatty acid supplementation on ruminal in situ forage degradability, performance, and physiological responses of feeder cattle.”, Journal of Animal Science, vol. 89, no. 11, pp. 3677-89, 2011.

J. J. Loor, Moyes, K. M., and Bionaz, M., “Functional adaptations of the transcriptome to mastitis-causing pathogens: the mammary gland and beyond.”, J Mammary Gland Biol Neoplasia, vol. 16, no. 4, pp. 305-22, 2011.

D. D. Johnson, Davies, K. W., and Cooke, R. F., “Oregon Beef Council Report”, Oregon Beef Council Report 2011 Edition, p. 65, 2011.

D. W. Bohnert, Delcurto, T., Clark, A. A., Merrill, M. L., Falck, S. J., and Harmon, D. L., “Protein supplementation of ruminants consuming low-quality cool- or warm-season forage: differences in intake and digestibility.”, Journal of Animal Science, vol. 89, no. 11, pp. 3707-17, 2011.

D. E. Graugnard, Bionaz, M., Trevisi, E., Moyes, K. M., Salak-Johnson, J. L., Wallace, R. L., Drackley, J. K., Bertoni, G., and Loor, J. J., “Blood immunometabolic indices and polymorphonuclear neutrophil function in peripartum dairy cows are altered by level of dietary energy prepartum.”, J Dairy Sci, vol. 95, no. 4, pp. 1749-58, 2012.

R. F. Cooke, Bohnert, D. W., Cappellozza, B. Ieda, Mueller, C. J., and Delcurto, T., “Effects of temperament and acclimation to handling on reproductive performance of Bos taurus beef females.”, J Anim Sci, vol. 90, no. 10, pp. 3547-55, 2012.

J. R. Jaeger and Delcurto, T., “Endogenous prostaglandin F2α concentrations in bovine whole semen, seminal plasma, and extended semen.”, Theriogenology, vol. 78, no. 2, pp. 369-75, 2012.

M. Bionaz, Thering, B. J., and Loor, J. J., “Fine metabolic regulation in ruminants via nutrient-gene interactions: saturated long-chain fatty acids increase expression of genes involved in lipid metabolism and immune response partly through PPAR-α activation.”, Br J Nutr, vol. 107, no. 2, pp. 179-91, 2012.

M. Bionaz, Periasamy, K., Rodriguez-Zas, S. L., Hurley, W. L., and Loor, J. J., “A novel dynamic impact approach (DIA) for functional analysis of time-course omics studies: validation using the bovine mammary transcriptome.”, PLoS One, vol. 7, no. 3, p. e32455, 2012.

M. Bionaz, Periasamy, K., Rodriguez-Zas, S. L., Everts, R. E., Lewin, H. A., Hurley, W. L., and Loor, J. J., “Old and new stories: revelations from functional analysis of the bovine mammary transcriptome during the lactation cycle.”, PLoS One, vol. 7, no. 3, p. e33268, 2012.

T. W. Cook, Cappellozza, B. Ieda, Filho, T. A. Guarnie, and Bohnert, D. W., “Effects of flunixin meglumine administration on physiological and performance responses of transported feeder cattle1”, Journal of Animal Science, vol. 91518781868382902315847897878989904885459062751459088178518579385927439, no. 11, pp. 5500 - 5506, 2013.

H. Akbar, Bionaz, M., Carlson, D. B., Rodriguez-Zas, S. L., Everts, R. E., Lewin, H. A., Drackley, J. K., and Loor, J. J., “Feed restriction, but not l-carnitine infusion, alters the liver transcriptome by inhibiting sterol synthesis and mitochondrial oxidative phosphorylation and increasing gluconeogenesis in mid-lactation dairy cows.”, J Dairy Sci, vol. 96, no. 4, pp. 2201-13, 2013.

D. W. Bohnert, Cooke, R. F., Marques, R. S., Francisco, C. L., Cappellozza, B. Ieda, McGuire, D. L., and Falck, S. J., “Protein Supplementation of Low-Quality Cool-Season and Warm-Season Forages”, in Proc. West. Sec. Am. Soc. Anim. Sci, 2013.

T. M. Grala, Kay, J. K., Phyn, C. V. C., Bionaz, M., Walker, C. G., Rius, A. G., Snell, R. G., and Roche, J. R., “Reducing milking frequency during nutrient restriction has no effect on the hepatic transcriptome of lactating dairy cattle.”, Physiol Genomics, vol. 45, no. 23, pp. 1157-67, 2013.

J. J. Loor, Bionaz, M., and Drackley, J. K., “Systems physiology in dairy cattle: nutritional genomics and beyond.”, Annu Rev Anim Biosci, vol. 1, pp. 365-92, 2013.

M. K. Petersen, Mueller, C. J., Mulliniks, J. T., Roberts, A. J., Delcurto, T., and Waterman, R. C., “Beef Species Symposium: potential limitations of NRC in predicting energetic requirements of beef females within western U.S. grazing systems.”, J Anim Sci, vol. 92, no. 7, pp. 2800-8, 2014.

K. Shahzad, Bionaz, M., Trevisi, E., Bertoni, G., Rodriguez-Zas, S. L., and Loor, J. J., “Integrative analyses of hepatic differentially expressed genes and blood biomarkers during the peripartal period between dairy cows overfed or restricted-fed energy prepartum.”, PLoS One, vol. 9, no. 6, p. e99757, 2014.

A. Bouma, Durham, C. A., and Meunier-Goddik, L., “Start-up and operating costs for artisan cheese companies.”, J Dairy Sci, vol. 97, no. 6, pp. 3964-72, 2014.

B. K. Pekin, Wisdom, M. J., Endress, B. A., Naylor, B. J., and Parks, C. G., “Ungulate browsing maintains shrub diversity in the absence of episodic disturbance in seasonally-arid conifer forest.”, PLoS One, vol. 9, no. 1, p. e86288, 2014.

C. A. Durham, Bouma, A., and Meunier-Goddik, L., “A decision-making tool to determine economic feasibility and break-even prices for artisan cheese operations.”, J Dairy Sci, vol. 98, no. 12, pp. 8319-32, 2015.

T. Leiva, Cooke, R. F., Brandão, A. P., Marques, R. S., and Vasconcelos, J. L. M., “Effects of rumen-protected choline supplementation on metabolic and performance responses of transition dairy cows.”, J Anim Sci, vol. 93, no. 4, pp. 1896-904, 2015.